Command Log: March 27, 2017, 9:20 am

clear
echo test
whoami
pwd
ls
git clone https://github.com/eharstad/filesystem.git
ls
cd filesystem/users
pwd
cd /Users/eharstad/filesystem/users
pwd
ls
cd nelle
pwd
ls -F
ls -F data
cd data
pwd
ls -F
pwd
cd ..
pwd
ls -F -a
pwd
cd data
ls
cd ..
pwd
cd data/..
pwd
ls
ls north-pacific-gyre/2012-07-03/
ls -F
pwd
ls -F
mkdir thesis
ls -F
cd thesis
touch draft.txt
ls -F
mv draft.txt draft2.txt
ls
mv draft2.txt draft.txt
nano draft.txt
rm draft.txt
ls
nano draft.txt
ls
cd ..
pwd
ls
rm thesis 
rmdir thesis
rm thesis/draft.txt
ls thesis
rmdir thesis
ls
mkdir thesis
nano thesis/draft.txt
mv thesis/draft.txt thesis/quotes.txt
ls thesis
mv thesis new_thesis
ls
mv new_thesis thesis
ls
mv thesis/quotes.txt .
ls thesis
ls
ls quotes.txt
cp quotes.txt thesis/quotations.txt
ls quotes.txt thesis/quotations.txt
ls ~
ls ~/filesystem/users/nelle
man ls
pwd
ls
ls molecules/
cd molecules/
wc *.pdb
ls *.pdb
ls p*.pdb
ls *ethane.pdb
ls p*o*.pdb
ls ?ethane.pdb
wc *.pdb
wc -l *.pdb
wc -l *.pdb > lengths.txt
ls
cat lengths.txt
sort -n lengths.txt 
sort -n lengths.txt > sorted-lengths.txt
ls
cat sorted-lengths.txt 
head -1 sorted-lengths.txt
sort -n lengths.txt | head -1
wc -l *.pdb | sort -n | head -1
head -2 sorted-lengths.txt
man head
head -n 1 sorted-lengths.txt 
pwd
cd ../north-pacific-gyre/2012-07-03/
pwd
ls
wc -l *.txt
wc -l *.txt | sort -n | head -5
wc -l *.txt | sort -n | tail -5
ls *[AB].txt 
echo hello
nano animals.txt
cut -d , -f 2 animals.txt 
cut -d , -f 2 animals.txt | sort
cut -d , -f 2 animals.txt | sort | uniq
pwd
cd ../..
pwd
cd creatures/
pwd
ls
for filename in basilisk.dat unicorn.dat; do head -3 $filename; done
echo *.dat
for filename in *.dat; do echo $filename; head -100 $filename | tail -20 ; done
touch red\ dragon.dat
ls
for filename in *.dat; do head -1 $filename; done
for filename in *.dat; do head -1 "$filename"; done
rm red\ dragon.dat
for filename in *.dat; do echo mv $filename original-$filename; done
for filename in *.dat; do mv $filename original-$filename; done
ls
pwd
cd ../north-pacific-gyre/2012-07-03/
pwd
ls
rm animals.txt 
ls
for datafile in *[AB].txt; do echo $datafile; done
for datafile in *[AB].txt; do echo bash goostats $datafile stats-$datafile; done
for datafile in *[AB].txt; do bash goostats $datafile stats-$datafile; done
ls
for datafile in N*[AB].txt; do echo $datafile; bash goostats $datafile stats-$datafile; done
ls
ls N*[AB].txt | wc -l
ls stats-N*[AB].txt | wc -l
history
history | tail -5
ls N*[AB].txt | wc -l
clear
pwd
cd ../..
pwd
ls
cd molecules/
pwd
nano middle.sh
ls
nano middle.sh 
bash middle.sh
nano middle.sh
bash middle.sh octane.pdb
bash middle.sh pentane.pdb
nano middle.sh 
bash middle.sh pentane.pdb -10 -2
pwd
nano sorted.sh
bash sorted.sh *.pdb ../creatures/*.dat
nano sorted.sh
bash sorted.sh *.pdb ../creatures/*.dat
nano sorted.sh
nano sorted.sh
pwd
cd ../north-pacific-gyre/2012-07-03/
pwd
nano do-stats.sh
bash do-stats.sh N*[AB].txt
pwd
cd ../..
pwd
ls
cd writing/
pwd
ls
cat haiku.txt 
grep not haiku.txt 
grep day haiku.txt 
grep -w day haiku.txt 
grep -n it haiku.txt 
grep -i -v the haiku.txt 
grep -E '^.o' haiku.txt 
find . -type d
find . -type f
find . -maxdepth 1 -type f
find . -mindepth 2 -type f
find . -name *.txt
find . -name "*.txt"
find . -name "*.txt" | wc -l
wc -l $(find . -name "*.txt")
grep FE $(find .. -name "*.pdb")
pwd
ls
cd
pwd
clear
ls
rm -r planets/
rm -rf planets/
clear
git config --global user.name "Emelie Harstad"
git config --global user.email "eharstad@unl.edu"
git config --global color.ui "auto"
git config --global core.editor "nano -w"
git config --list
mkdir planets
cd planets
git init
ls
ls -a
git status
nano mars.txt
ls 
cat mars.txt 
git status
git add mars.txt
git commit -m "Start notes on Mars as a base"
git status
git log
nano mars.txt
git status
git diff
git commit -m "Add concerns about effects of Mars' moons on Wolfman"
git add mars.txt
git commit -m "Add concerns about effects of Mars' moons on Wolfman"
nano mars.txt
git diff
git add mars.txt
git diff
git commit -m "Discuss concerns about Mars' climate for Mummy"
git status
git log
git log --oneline
pwd
git diff HEAD~1 mars.txt
git diff HEAD~2 mars.txt
git log --oneline
git diff 95fb63b mars.txt
git log
nano mars.txt
git status
git checkout HEAD mars.txt
cat mars.txt
git checkout HEAD~1 mars.txt
cat mars.txt
git checkout -- mars.txt
cat mars.txt
cat mars.txt
git log
git checkout HEAD mars.txt
cat mars.txt
git checkout  2ba357fa3 mars.txt
cat mars.txt
pwd
nano .gitignore
touch a.dat b.dat c.dat results/a.out results/b.out
mkdir results
ls
touch results/a.out results/b.out
ls
ls results/
nano .gitignore
git status
git add .gitignore
git commit -m "Adding the ignore file"
git status
git add a.dat
pwd
git remote add origin https://github.com/eharstad/planets.git
git remote -v
git push origin master
git pull origin master
pwd
git pull origin master
ls
pwd
git pull original master
git pull origin master
nano mars.txt
git add mars.txt
git commit -m "Adding a line in our home copy"
git push origin master
git remote -v
git pull origin master
cat mars.txt