Alignment Tools

BLAST

• Description: How to use BLAST on HCC machines

BLAT

• Description: How to run BLAT on HCC resources

Bowtie

• Description: How to run Bowtie on HCC resources

Bowtie2

• Description: How to run Bowtie2 on HCC resources

BWA

• Description: How to use BWA on HCC machines

Clustal Omega

• Description: How to run Clustal Omega on HCC resources

TopHat/TopHat2

• Description: How to run TopHat/TopHat2 on HCC resources