Biodata Module

HCC hosts multiple databases (BLAST, KEGG, PANTHER, InterProScan), genome files, short read aligned indices etc. on Swan.
In order to use these resources, the "biodata" module needs to be loaded first.
For how to load module, please check Module Commands.

Note

The biodata module is maintained and updated by the Bioinformatics Core Research Facility (BCRF). Please email bcrf-support@unl.edu or hcc-support@unl.edu with any questions or issues with the module.

Loading the "biodata" module will pre-set many environment variables, but most likely you will only need a subset of them. Environment variables can be used in your command or script by prefixing $ to the name.

The major environment variables are:
$DATA - main directory
$BLAST - Directory containing all available BLAST (nucleotide and protein) databases
$KEGG - KEGG database main entry point (requires license)
$PANTHER - PANTHER database main entry point (latest)
$IPR - InterProScan database main entry point (latest)
$GENOMES - Directory containing all available genomes (multiple sources, builds possible
$INDICES - Directory containing indices for bowtie, bowtie2, bwa for all available genomes
$UNIPROT - Directory containing latest release of full UniProt database

Note

To access the older format of BLAST databases that work with BLAST+ 2.9 and lower, please use the variable BLAST_V4. The variable BLAST points to the directory with the new version 5 of the nucleotide and protein databases required for BLAST+ 2.10 and higher.

In order to check what genomes are available, you can type:

$ ls $GENOMES

In order to check what BLAST databases are available, you can just type:

$ ls $BLAST

An example of how to run Bowtie2 local alignment on Swan utilizing the default Horse, Equus caballus index (BOWTIE2_HORSE) with paired-end fasta files and 8 CPUs is shown below:

#!/bin/bash
#SBATCH --job-name=Bowtie2
#SBATCH --nodes=1
#SBATCH --ntasks-per-node=8
#SBATCH --time=168:00:00
#SBATCH --mem=10gb
#SBATCH --output=Bowtie2.%J.out
#SBATCH --error=Bowtie2.%J.err

module load bowtie/2.2
module load biodata

bowtie2 -x $BOWTIE2_HORSE -f -1 input_reads_pair_1.fasta -2 input_reads_pair_2.fasta -S bowtie2_alignments.sam --local -p $SLURM_NTASKS_PER_NODE

An example of BLAST run against the non-redundant nucleotide database available on Swan is provided below:

#!/bin/bash
#SBATCH --job-name=BlastN
#SBATCH --nodes=1
#SBATCH --ntasks-per-node=8
#SBATCH --time=168:00:00
#SBATCH --mem=10gb
#SBATCH --output=BlastN.%J.out
#SBATCH --error=BlastN.%J.err

module load blast/2.10
module load biodata
cp $BLAST/nt.* /scratch
cp input_reads.fasta /scratch

blastn -db /scratch/nt -query /scratch/input_reads.fasta -out /scratch/blast_nucleotide.results
cp /scratch/blast_nucleotide.results .

Available Organisms¶

The organisms and their appropriate environmental variables for all genomes and chromosome files, as well as indices are shown in the table below.

last generated 2025-06-02T23:27:48CDT

Short	Section	Scientific	Source	Build	Type
ATH	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Main Directory
GENOME_ATH	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Genome Fasta File
CHR_ATH	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Chromosome Fasta Files
BOWTIE_ATH	bowtie	Arabidopsis_thaliana	NCBI	TAIR10	Bowtie\|Bowtie2 Index
BOWTIE2_ATH	bowtie2	Arabidopsis_thaliana	NCBI	TAIR10	Bowtie\|Bowtie2 Index
BWA_ATH	bwa	Arabidopsis_thaliana	NCBI	TAIR10	Bwa Index
PICARD_ATH	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Picard .dict File
FAIDX_ATH	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Fasta Index .fai File
ARABIDOPSIS_THALIANA_NCBI_TAIR10	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Main Directory
GENOME_ARABIDOPSIS_THALIANA_NCBI_TAIR10	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Genome Fasta File
CHR_ARABIDOPSIS_THALIANA_NCBI_TAIR10	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Chromosome Fasta Files
BOWTIE_ARABIDOPSIS_THALIANA_NCBI_TAIR10	bowtie	Arabidopsis_thaliana	NCBI	TAIR10	Bowtie\|Bowtie2 Index
BOWTIE2_ARABIDOPSIS_THALIANA_NCBI_TAIR10	bowtie2	Arabidopsis_thaliana	NCBI	TAIR10	Bowtie\|Bowtie2 Index
BWA_ARABIDOPSIS_THALIANA_NCBI_TAIR10	bwa	Arabidopsis_thaliana	NCBI	TAIR10	Bwa Index
PICARD_ARABIDOPSIS_THALIANA_NCBI_TAIR10	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Picard .dict File
FAIDX_ARABIDOPSIS_THALIANA_NCBI_TAIR10	genomes	Arabidopsis_thaliana	NCBI	TAIR10	Fasta Index .fai File
BACILLUS_CEREUS_ATCC_10987	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Main Directory
GENOME_BACILLUS_CEREUS_ATCC_10987	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Genome Fasta File
CHR_BACILLUS_CEREUS_ATCC_10987	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Chromosome Fasta Files
BOWTIE_BACILLUS_CEREUS_ATCC_10987	bowtie	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bowtie\|Bowtie2 Index
BOWTIE2_BACILLUS_CEREUS_ATCC_10987	bowtie2	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bowtie\|Bowtie2 Index
BWA_BACILLUS_CEREUS_ATCC_10987	bwa	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bwa Index
PICARD_BACILLUS_CEREUS_ATCC_10987	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Picard .dict File
FAIDX_BACILLUS_CEREUS_ATCC_10987	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Fasta Index .fai File
BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Main Directory
GENOME_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Genome Fasta File
CHR_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Chromosome Fasta Files
BOWTIE_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	bowtie	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bowtie\|Bowtie2 Index
BOWTIE2_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	bowtie2	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bowtie\|Bowtie2 Index
BWA_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	bwa	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Bwa Index
PICARD_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Picard .dict File
FAIDX_BACILLUS_CEREUS_ATCC_10987_NCBI_2004_02_13	genomes	Bacillus_cereus_ATCC_10987	NCBI	2004-02-13	Fasta Index .fai File
BSUBT_168	genomes	Bacillus_subtilis_168	Ensembl	EB2	Main Directory
GENOME_BSUBT_168	genomes	Bacillus_subtilis_168	Ensembl	EB2	Genome Fasta File
CHR_BSUBT_168	genomes	Bacillus_subtilis_168	Ensembl	EB2	Chromosome Fasta Files
BOWTIE_BSUBT_168	bowtie	Bacillus_subtilis_168	Ensembl	EB2	Bowtie\|Bowtie2 Index
BOWTIE2_BSUBT_168	bowtie2	Bacillus_subtilis_168	Ensembl	EB2	Bowtie\|Bowtie2 Index
BWA_BSUBT_168	bwa	Bacillus_subtilis_168	Ensembl	EB2	Bwa Index
PICARD_BSUBT_168	genomes	Bacillus_subtilis_168	Ensembl	EB2	Picard .dict File
FAIDX_BSUBT_168	genomes	Bacillus_subtilis_168	Ensembl	EB2	Fasta Index .fai File
BACILLUS_SUBTILIS_168_ENSEMBL_EB2	genomes	Bacillus_subtilis_168	Ensembl	EB2	Main Directory
GENOME_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	genomes	Bacillus_subtilis_168	Ensembl	EB2	Genome Fasta File
CHR_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	genomes	Bacillus_subtilis_168	Ensembl	EB2	Chromosome Fasta Files
BOWTIE_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	bowtie	Bacillus_subtilis_168	Ensembl	EB2	Bowtie\|Bowtie2 Index
BOWTIE2_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	bowtie2	Bacillus_subtilis_168	Ensembl	EB2	Bowtie\|Bowtie2 Index
BWA_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	bwa	Bacillus_subtilis_168	Ensembl	EB2	Bwa Index
PICARD_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	genomes	Bacillus_subtilis_168	Ensembl	EB2	Picard .dict File
FAIDX_BACILLUS_SUBTILIS_168_ENSEMBL_EB2	genomes	Bacillus_subtilis_168	Ensembl	EB2	Fasta Index .fai File
BOS_GRUNNIENS_X_BOS_TAURUS	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Main Directory
GENOME_BOS_GRUNNIENS_X_BOS_TAURUS	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Genome Fasta File
CHR_BOS_GRUNNIENS_X_BOS_TAURUS	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Chromosome Fasta Files
BOWTIE_BOS_GRUNNIENS_X_BOS_TAURUS	bowtie	Bos_grunniens_x_Bos_taurus	NCBI	1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_GRUNNIENS_X_BOS_TAURUS	bowtie2	Bos_grunniens_x_Bos_taurus	NCBI	1	Bowtie\|Bowtie2 Index
BWA_BOS_GRUNNIENS_X_BOS_TAURUS	bwa	Bos_grunniens_x_Bos_taurus	NCBI	1	Bwa Index
PICARD_BOS_GRUNNIENS_X_BOS_TAURUS	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Picard .dict File
FAIDX_BOS_GRUNNIENS_X_BOS_TAURUS	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Fasta Index .fai File
BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Main Directory
GENOME_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Genome Fasta File
CHR_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Chromosome Fasta Files
BOWTIE_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	bowtie	Bos_grunniens_x_Bos_taurus	NCBI	1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	bowtie2	Bos_grunniens_x_Bos_taurus	NCBI	1	Bowtie\|Bowtie2 Index
BWA_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	bwa	Bos_grunniens_x_Bos_taurus	NCBI	1	Bwa Index
PICARD_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Picard .dict File
FAIDX_BOS_GRUNNIENS_X_BOS_TAURUS_NCBI_1	genomes	Bos_grunniens_x_Bos_taurus	NCBI	1	Fasta Index .fai File
BOS_TAURUS_ENSEMBL_UMD3_1	genomes	Bos_taurus	Ensembl	UMD3.1	Main Directory
GENOME_BOS_TAURUS_ENSEMBL_UMD3_1	genomes	Bos_taurus	Ensembl	UMD3.1	Genome Fasta File
CHR_BOS_TAURUS_ENSEMBL_UMD3_1	genomes	Bos_taurus	Ensembl	UMD3.1	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_ENSEMBL_UMD3_1	bowtie	Bos_taurus	Ensembl	UMD3.1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_ENSEMBL_UMD3_1	bowtie2	Bos_taurus	Ensembl	UMD3.1	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_ENSEMBL_UMD3_1	bwa	Bos_taurus	Ensembl	UMD3.1	Bwa Index
PICARD_BOS_TAURUS_ENSEMBL_UMD3_1	genomes	Bos_taurus	Ensembl	UMD3.1	Picard .dict File
FAIDX_BOS_TAURUS_ENSEMBL_UMD3_1	genomes	Bos_taurus	Ensembl	UMD3.1	Fasta Index .fai File
BOS_TAURUS_ENSEMBL_UMD_3_1	genomes	Bos_taurus	Ensembl	UMD_3.1	Main Directory
GENOME_BOS_TAURUS_ENSEMBL_UMD_3_1	genomes	Bos_taurus	Ensembl	UMD_3.1	Genome Fasta File
CHR_BOS_TAURUS_ENSEMBL_UMD_3_1	genomes	Bos_taurus	Ensembl	UMD_3.1	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_ENSEMBL_UMD_3_1	bowtie	Bos_taurus	Ensembl	UMD_3.1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_ENSEMBL_UMD_3_1	bowtie2	Bos_taurus	Ensembl	UMD_3.1	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_ENSEMBL_UMD_3_1	bwa	Bos_taurus	Ensembl	UMD_3.1	Bwa Index
PICARD_BOS_TAURUS_ENSEMBL_UMD_3_1	genomes	Bos_taurus	Ensembl	UMD_3.1	Picard .dict File
FAIDX_BOS_TAURUS_ENSEMBL_UMD_3_1	genomes	Bos_taurus	Ensembl	UMD_3.1	Fasta Index .fai File
BOS_TAURUS_NCBI_ARS_UCD1_2	genomes	Bos_taurus	NCBI	ARS-UCD1.2	Main Directory
GENOME_BOS_TAURUS_NCBI_ARS_UCD1_2	genomes	Bos_taurus	NCBI	ARS-UCD1.2	Genome Fasta File
CHR_BOS_TAURUS_NCBI_ARS_UCD1_2	genomes	Bos_taurus	NCBI	ARS-UCD1.2	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_NCBI_ARS_UCD1_2	bowtie	Bos_taurus	NCBI	ARS-UCD1.2	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_NCBI_ARS_UCD1_2	bowtie2	Bos_taurus	NCBI	ARS-UCD1.2	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_NCBI_ARS_UCD1_2	bwa	Bos_taurus	NCBI	ARS-UCD1.2	Bwa Index
PICARD_BOS_TAURUS_NCBI_ARS_UCD1_2	genomes	Bos_taurus	NCBI	ARS-UCD1.2	Picard .dict File
FAIDX_BOS_TAURUS_NCBI_ARS_UCD1_2	genomes	Bos_taurus	NCBI	ARS-UCD1.2	Fasta Index .fai File
COW	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Main Directory
GENOME_COW	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Genome Fasta File
CHR_COW	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Chromosome Fasta Files
BOWTIE_COW	bowtie	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bowtie\|Bowtie2 Index
BOWTIE2_COW	bowtie2	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bowtie\|Bowtie2 Index
BWA_COW	bwa	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bwa Index
PICARD_COW	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Picard .dict File
FAIDX_COW	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Fasta Index .fai File
BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Main Directory
GENOME_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Genome Fasta File
CHR_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	bowtie	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	bowtie2	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	bwa	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Bwa Index
PICARD_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Picard .dict File
FAIDX_BOS_TAURUS_NCBI_ARS_UCD1_2_NO_UNPLACED	genomes	Bos_taurus	NCBI	ARS-UCD1.2-no_unplaced	Fasta Index .fai File
BOS_TAURUS_NCBI_ARS_UCD2_0	genomes	Bos_taurus	NCBI	ARS-UCD2.0	Main Directory
GENOME_BOS_TAURUS_NCBI_ARS_UCD2_0	genomes	Bos_taurus	NCBI	ARS-UCD2.0	Genome Fasta File
CHR_BOS_TAURUS_NCBI_ARS_UCD2_0	genomes	Bos_taurus	NCBI	ARS-UCD2.0	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_NCBI_ARS_UCD2_0	bowtie	Bos_taurus	NCBI	ARS-UCD2.0	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_NCBI_ARS_UCD2_0	bowtie2	Bos_taurus	NCBI	ARS-UCD2.0	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_NCBI_ARS_UCD2_0	bwa	Bos_taurus	NCBI	ARS-UCD2.0	Bwa Index
PICARD_BOS_TAURUS_NCBI_ARS_UCD2_0	genomes	Bos_taurus	NCBI	ARS-UCD2.0	Picard .dict File
FAIDX_BOS_TAURUS_NCBI_ARS_UCD2_0	genomes	Bos_taurus	NCBI	ARS-UCD2.0	Fasta Index .fai File
BOS_TAURUS_NCBI_UMD_3_1	genomes	Bos_taurus	NCBI	UMD_3.1	Main Directory
GENOME_BOS_TAURUS_NCBI_UMD_3_1	genomes	Bos_taurus	NCBI	UMD_3.1	Genome Fasta File
CHR_BOS_TAURUS_NCBI_UMD_3_1	genomes	Bos_taurus	NCBI	UMD_3.1	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_NCBI_UMD_3_1	bowtie	Bos_taurus	NCBI	UMD_3.1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_NCBI_UMD_3_1	bowtie2	Bos_taurus	NCBI	UMD_3.1	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_NCBI_UMD_3_1	bwa	Bos_taurus	NCBI	UMD_3.1	Bwa Index
PICARD_BOS_TAURUS_NCBI_UMD_3_1	genomes	Bos_taurus	NCBI	UMD_3.1	Picard .dict File
FAIDX_BOS_TAURUS_NCBI_UMD_3_1	genomes	Bos_taurus	NCBI	UMD_3.1	Fasta Index .fai File
BOS_TAURUS_NCBI_UMD_3_1_1	genomes	Bos_taurus	NCBI	UMD_3.1.1	Main Directory
GENOME_BOS_TAURUS_NCBI_UMD_3_1_1	genomes	Bos_taurus	NCBI	UMD_3.1.1	Genome Fasta File
CHR_BOS_TAURUS_NCBI_UMD_3_1_1	genomes	Bos_taurus	NCBI	UMD_3.1.1	Chromosome Fasta Files
BOWTIE_BOS_TAURUS_NCBI_UMD_3_1_1	bowtie	Bos_taurus	NCBI	UMD_3.1.1	Bowtie\|Bowtie2 Index
BOWTIE2_BOS_TAURUS_NCBI_UMD_3_1_1	bowtie2	Bos_taurus	NCBI	UMD_3.1.1	Bowtie\|Bowtie2 Index
BWA_BOS_TAURUS_NCBI_UMD_3_1_1	bwa	Bos_taurus	NCBI	UMD_3.1.1	Bwa Index
PICARD_BOS_TAURUS_NCBI_UMD_3_1_1	genomes	Bos_taurus	NCBI	UMD_3.1.1	Picard .dict File
FAIDX_BOS_TAURUS_NCBI_UMD_3_1_1	genomes	Bos_taurus	NCBI	UMD_3.1.1	Fasta Index .fai File
CELEGANS	genomes	Caenorhabditis_elegans	NCBI	WS195	Main Directory
GENOME_CELEGANS	genomes	Caenorhabditis_elegans	NCBI	WS195	Genome Fasta File
CHR_CELEGANS	genomes	Caenorhabditis_elegans	NCBI	WS195	Chromosome Fasta Files
BOWTIE_CELEGANS	bowtie	Caenorhabditis_elegans	NCBI	WS195	Bowtie\|Bowtie2 Index
BOWTIE2_CELEGANS	bowtie2	Caenorhabditis_elegans	NCBI	WS195	Bowtie\|Bowtie2 Index
BWA_CELEGANS	bwa	Caenorhabditis_elegans	NCBI	WS195	Bwa Index
PICARD_CELEGANS	genomes	Caenorhabditis_elegans	NCBI	WS195	Picard .dict File
FAIDX_CELEGANS	genomes	Caenorhabditis_elegans	NCBI	WS195	Fasta Index .fai File
CAENORHABDITIS_ELEGANS_NCBI_WS195	genomes	Caenorhabditis_elegans	NCBI	WS195	Main Directory
GENOME_CAENORHABDITIS_ELEGANS_NCBI_WS195	genomes	Caenorhabditis_elegans	NCBI	WS195	Genome Fasta File
CHR_CAENORHABDITIS_ELEGANS_NCBI_WS195	genomes	Caenorhabditis_elegans	NCBI	WS195	Chromosome Fasta Files
BOWTIE_CAENORHABDITIS_ELEGANS_NCBI_WS195	bowtie	Caenorhabditis_elegans	NCBI	WS195	Bowtie\|Bowtie2 Index
BOWTIE2_CAENORHABDITIS_ELEGANS_NCBI_WS195	bowtie2	Caenorhabditis_elegans	NCBI	WS195	Bowtie\|Bowtie2 Index
BWA_CAENORHABDITIS_ELEGANS_NCBI_WS195	bwa	Caenorhabditis_elegans	NCBI	WS195	Bwa Index
PICARD_CAENORHABDITIS_ELEGANS_NCBI_WS195	genomes	Caenorhabditis_elegans	NCBI	WS195	Picard .dict File
FAIDX_CAENORHABDITIS_ELEGANS_NCBI_WS195	genomes	Caenorhabditis_elegans	NCBI	WS195	Fasta Index .fai File
DOG	genomes	Canis_familiaris	NCBI	build3.1	Main Directory
GENOME_DOG	genomes	Canis_familiaris	NCBI	build3.1	Genome Fasta File
CHR_DOG	genomes	Canis_familiaris	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_DOG	bowtie	Canis_familiaris	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_DOG	bowtie2	Canis_familiaris	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_DOG	bwa	Canis_familiaris	NCBI	build3.1	Bwa Index
PICARD_DOG	genomes	Canis_familiaris	NCBI	build3.1	Picard .dict File
FAIDX_DOG	genomes	Canis_familiaris	NCBI	build3.1	Fasta Index .fai File
CANIS_FAMILIARIS_NCBI_BUILD3_1	genomes	Canis_familiaris	NCBI	build3.1	Main Directory
GENOME_CANIS_FAMILIARIS_NCBI_BUILD3_1	genomes	Canis_familiaris	NCBI	build3.1	Genome Fasta File
CHR_CANIS_FAMILIARIS_NCBI_BUILD3_1	genomes	Canis_familiaris	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_CANIS_FAMILIARIS_NCBI_BUILD3_1	bowtie	Canis_familiaris	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_CANIS_FAMILIARIS_NCBI_BUILD3_1	bowtie2	Canis_familiaris	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_CANIS_FAMILIARIS_NCBI_BUILD3_1	bwa	Canis_familiaris	NCBI	build3.1	Bwa Index
PICARD_CANIS_FAMILIARIS_NCBI_BUILD3_1	genomes	Canis_familiaris	NCBI	build3.1	Picard .dict File
FAIDX_CANIS_FAMILIARIS_NCBI_BUILD3_1	genomes	Canis_familiaris	NCBI	build3.1	Fasta Index .fai File
ZEBRAFISH	genomes	Danio_rerio	NCBI	Zv9	Main Directory
GENOME_ZEBRAFISH	genomes	Danio_rerio	NCBI	Zv9	Genome Fasta File
CHR_ZEBRAFISH	genomes	Danio_rerio	NCBI	Zv9	Chromosome Fasta Files
BOWTIE_ZEBRAFISH	bowtie	Danio_rerio	NCBI	Zv9	Bowtie\|Bowtie2 Index
BOWTIE2_ZEBRAFISH	bowtie2	Danio_rerio	NCBI	Zv9	Bowtie\|Bowtie2 Index
BWA_ZEBRAFISH	bwa	Danio_rerio	NCBI	Zv9	Bwa Index
PICARD_ZEBRAFISH	genomes	Danio_rerio	NCBI	Zv9	Picard .dict File
FAIDX_ZEBRAFISH	genomes	Danio_rerio	NCBI	Zv9	Fasta Index .fai File
DANIO_RERIO_NCBI_ZV9	genomes	Danio_rerio	NCBI	Zv9	Main Directory
GENOME_DANIO_RERIO_NCBI_ZV9	genomes	Danio_rerio	NCBI	Zv9	Genome Fasta File
CHR_DANIO_RERIO_NCBI_ZV9	genomes	Danio_rerio	NCBI	Zv9	Chromosome Fasta Files
BOWTIE_DANIO_RERIO_NCBI_ZV9	bowtie	Danio_rerio	NCBI	Zv9	Bowtie\|Bowtie2 Index
BOWTIE2_DANIO_RERIO_NCBI_ZV9	bowtie2	Danio_rerio	NCBI	Zv9	Bowtie\|Bowtie2 Index
BWA_DANIO_RERIO_NCBI_ZV9	bwa	Danio_rerio	NCBI	Zv9	Bwa Index
PICARD_DANIO_RERIO_NCBI_ZV9	genomes	Danio_rerio	NCBI	Zv9	Picard .dict File
FAIDX_DANIO_RERIO_NCBI_ZV9	genomes	Danio_rerio	NCBI	Zv9	Fasta Index .fai File
FRUITFLY	genomes	Drosophila_melanogaster	NCBI	build5.41	Main Directory
GENOME_FRUITFLY	genomes	Drosophila_melanogaster	NCBI	build5.41	Genome Fasta File
CHR_FRUITFLY	genomes	Drosophila_melanogaster	NCBI	build5.41	Chromosome Fasta Files
BOWTIE_FRUITFLY	bowtie	Drosophila_melanogaster	NCBI	build5.41	Bowtie\|Bowtie2 Index
BOWTIE2_FRUITFLY	bowtie2	Drosophila_melanogaster	NCBI	build5.41	Bowtie\|Bowtie2 Index
BWA_FRUITFLY	bwa	Drosophila_melanogaster	NCBI	build5.41	Bwa Index
PICARD_FRUITFLY	genomes	Drosophila_melanogaster	NCBI	build5.41	Picard .dict File
FAIDX_FRUITFLY	genomes	Drosophila_melanogaster	NCBI	build5.41	Fasta Index .fai File
DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	genomes	Drosophila_melanogaster	NCBI	build5.41	Main Directory
GENOME_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	genomes	Drosophila_melanogaster	NCBI	build5.41	Genome Fasta File
CHR_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	genomes	Drosophila_melanogaster	NCBI	build5.41	Chromosome Fasta Files
BOWTIE_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	bowtie	Drosophila_melanogaster	NCBI	build5.41	Bowtie\|Bowtie2 Index
BOWTIE2_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	bowtie2	Drosophila_melanogaster	NCBI	build5.41	Bowtie\|Bowtie2 Index
BWA_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	bwa	Drosophila_melanogaster	NCBI	build5.41	Bwa Index
PICARD_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	genomes	Drosophila_melanogaster	NCBI	build5.41	Picard .dict File
FAIDX_DROSOPHILA_MELANOGASTER_NCBI_BUILD5_41	genomes	Drosophila_melanogaster	NCBI	build5.41	Fasta Index .fai File
ELAMBDA	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Main Directory
GENOME_ELAMBDA	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Genome Fasta File
CHR_ELAMBDA	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Chromosome Fasta Files
BOWTIE_ELAMBDA	bowtie	Enterobacteriophage_lambda	NCBI	1993-04-28	Bowtie\|Bowtie2 Index
BOWTIE2_ELAMBDA	bowtie2	Enterobacteriophage_lambda	NCBI	1993-04-28	Bowtie\|Bowtie2 Index
BWA_ELAMBDA	bwa	Enterobacteriophage_lambda	NCBI	1993-04-28	Bwa Index
PICARD_ELAMBDA	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Picard .dict File
FAIDX_ELAMBDA	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Fasta Index .fai File
ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Main Directory
GENOME_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Genome Fasta File
CHR_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Chromosome Fasta Files
BOWTIE_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	bowtie	Enterobacteriophage_lambda	NCBI	1993-04-28	Bowtie\|Bowtie2 Index
BOWTIE2_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	bowtie2	Enterobacteriophage_lambda	NCBI	1993-04-28	Bowtie\|Bowtie2 Index
BWA_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	bwa	Enterobacteriophage_lambda	NCBI	1993-04-28	Bwa Index
PICARD_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Picard .dict File
FAIDX_ENTEROBACTERIOPHAGE_LAMBDA_NCBI_1993_04_28	genomes	Enterobacteriophage_lambda	NCBI	1993-04-28	Fasta Index .fai File
EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	genomes	Equus_caballus	Ensembl	EquCab3.0	Main Directory
GENOME_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	genomes	Equus_caballus	Ensembl	EquCab3.0	Genome Fasta File
CHR_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	genomes	Equus_caballus	Ensembl	EquCab3.0	Chromosome Fasta Files
BOWTIE_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	bowtie	Equus_caballus	Ensembl	EquCab3.0	Bowtie\|Bowtie2 Index
BOWTIE2_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	bowtie2	Equus_caballus	Ensembl	EquCab3.0	Bowtie\|Bowtie2 Index
BWA_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	bwa	Equus_caballus	Ensembl	EquCab3.0	Bwa Index
PICARD_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	genomes	Equus_caballus	Ensembl	EquCab3.0	Picard .dict File
FAIDX_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0	genomes	Equus_caballus	Ensembl	EquCab3.0	Fasta Index .fai File
EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	genomes	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Main Directory
GENOME_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	genomes	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Genome Fasta File
CHR_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	genomes	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Chromosome Fasta Files
BOWTIE_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	bowtie	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Bowtie\|Bowtie2 Index
BOWTIE2_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	bowtie2	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Bowtie\|Bowtie2 Index
BWA_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	bwa	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Bwa Index
PICARD_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	genomes	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Picard .dict File
FAIDX_EQUUS_CABALLUS_ENSEMBL_EQUCAB3_0_NO_UNPLACED	genomes	Equus_caballus	Ensembl	EquCab3.0-no_unplaced	Fasta Index .fai File
HORSE	genomes	Equus_caballus	NCBI	EquCab2.0	Main Directory
GENOME_HORSE	genomes	Equus_caballus	NCBI	EquCab2.0	Genome Fasta File
CHR_HORSE	genomes	Equus_caballus	NCBI	EquCab2.0	Chromosome Fasta Files
BOWTIE_HORSE	bowtie	Equus_caballus	NCBI	EquCab2.0	Bowtie\|Bowtie2 Index
BOWTIE2_HORSE	bowtie2	Equus_caballus	NCBI	EquCab2.0	Bowtie\|Bowtie2 Index
BWA_HORSE	bwa	Equus_caballus	NCBI	EquCab2.0	Bwa Index
PICARD_HORSE	genomes	Equus_caballus	NCBI	EquCab2.0	Picard .dict File
FAIDX_HORSE	genomes	Equus_caballus	NCBI	EquCab2.0	Fasta Index .fai File
EQUUS_CABALLUS_NCBI_EQUCAB2_0	genomes	Equus_caballus	NCBI	EquCab2.0	Main Directory
GENOME_EQUUS_CABALLUS_NCBI_EQUCAB2_0	genomes	Equus_caballus	NCBI	EquCab2.0	Genome Fasta File
CHR_EQUUS_CABALLUS_NCBI_EQUCAB2_0	genomes	Equus_caballus	NCBI	EquCab2.0	Chromosome Fasta Files
BOWTIE_EQUUS_CABALLUS_NCBI_EQUCAB2_0	bowtie	Equus_caballus	NCBI	EquCab2.0	Bowtie\|Bowtie2 Index
BOWTIE2_EQUUS_CABALLUS_NCBI_EQUCAB2_0	bowtie2	Equus_caballus	NCBI	EquCab2.0	Bowtie\|Bowtie2 Index
BWA_EQUUS_CABALLUS_NCBI_EQUCAB2_0	bwa	Equus_caballus	NCBI	EquCab2.0	Bwa Index
PICARD_EQUUS_CABALLUS_NCBI_EQUCAB2_0	genomes	Equus_caballus	NCBI	EquCab2.0	Picard .dict File
FAIDX_EQUUS_CABALLUS_NCBI_EQUCAB2_0	genomes	Equus_caballus	NCBI	EquCab2.0	Fasta Index .fai File
EQUUS_CABALLUS_NCBI_EQUCAB3_0	genomes	Equus_caballus	NCBI	EquCab3.0	Main Directory
GENOME_EQUUS_CABALLUS_NCBI_EQUCAB3_0	genomes	Equus_caballus	NCBI	EquCab3.0	Genome Fasta File
CHR_EQUUS_CABALLUS_NCBI_EQUCAB3_0	genomes	Equus_caballus	NCBI	EquCab3.0	Chromosome Fasta Files
BOWTIE_EQUUS_CABALLUS_NCBI_EQUCAB3_0	bowtie	Equus_caballus	NCBI	EquCab3.0	Bowtie\|Bowtie2 Index
BOWTIE2_EQUUS_CABALLUS_NCBI_EQUCAB3_0	bowtie2	Equus_caballus	NCBI	EquCab3.0	Bowtie\|Bowtie2 Index
BWA_EQUUS_CABALLUS_NCBI_EQUCAB3_0	bwa	Equus_caballus	NCBI	EquCab3.0	Bwa Index
PICARD_EQUUS_CABALLUS_NCBI_EQUCAB3_0	genomes	Equus_caballus	NCBI	EquCab3.0	Picard .dict File
FAIDX_EQUUS_CABALLUS_NCBI_EQUCAB3_0	genomes	Equus_caballus	NCBI	EquCab3.0	Fasta Index .fai File
ESCHERICHIA_COLI_K_12_DH10B	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Main Directory
GENOME_ESCHERICHIA_COLI_K_12_DH10B	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Genome Fasta File
CHR_ESCHERICHIA_COLI_K_12_DH10B	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Chromosome Fasta Files
BOWTIE_ESCHERICHIA_COLI_K_12_DH10B	bowtie	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bowtie\|Bowtie2 Index
BOWTIE2_ESCHERICHIA_COLI_K_12_DH10B	bowtie2	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bowtie\|Bowtie2 Index
BWA_ESCHERICHIA_COLI_K_12_DH10B	bwa	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bwa Index
PICARD_ESCHERICHIA_COLI_K_12_DH10B	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Picard .dict File
FAIDX_ESCHERICHIA_COLI_K_12_DH10B	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Fasta Index .fai File
ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Main Directory
GENOME_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Genome Fasta File
CHR_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Chromosome Fasta Files
BOWTIE_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	bowtie	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bowtie\|Bowtie2 Index
BOWTIE2_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	bowtie2	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bowtie\|Bowtie2 Index
BWA_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	bwa	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Bwa Index
PICARD_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Picard .dict File
FAIDX_ESCHERICHIA_COLI_K_12_DH10B_NCBI_2008_03_17	genomes	Escherichia_coli_K_12_DH10B	NCBI	2008-03-17	Fasta Index .fai File
ESCHERICHIA_COLI_K_12_MG1655	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Main Directory
GENOME_ESCHERICHIA_COLI_K_12_MG1655	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Genome Fasta File
CHR_ESCHERICHIA_COLI_K_12_MG1655	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Chromosome Fasta Files
BOWTIE_ESCHERICHIA_COLI_K_12_MG1655	bowtie	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bowtie\|Bowtie2 Index
BOWTIE2_ESCHERICHIA_COLI_K_12_MG1655	bowtie2	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bowtie\|Bowtie2 Index
BWA_ESCHERICHIA_COLI_K_12_MG1655	bwa	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bwa Index
PICARD_ESCHERICHIA_COLI_K_12_MG1655	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Picard .dict File
FAIDX_ESCHERICHIA_COLI_K_12_MG1655	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Fasta Index .fai File
ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Main Directory
GENOME_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Genome Fasta File
CHR_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Chromosome Fasta Files
BOWTIE_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	bowtie	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bowtie\|Bowtie2 Index
BOWTIE2_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	bowtie2	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bowtie\|Bowtie2 Index
BWA_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	bwa	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Bwa Index
PICARD_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Picard .dict File
FAIDX_ESCHERICHIA_COLI_K_12_MG1655_NCBI_2001_10_15	genomes	Escherichia_coli_K_12_MG1655	NCBI	2001-10-15	Fasta Index .fai File
CHICKEN	genomes	Gallus_gallus	NCBI	GRCg6a	Main Directory
GENOME_CHICKEN	genomes	Gallus_gallus	NCBI	GRCg6a	Genome Fasta File
CHR_CHICKEN	genomes	Gallus_gallus	NCBI	GRCg6a	Chromosome Fasta Files
BOWTIE_CHICKEN	bowtie	Gallus_gallus	NCBI	GRCg6a	Bowtie\|Bowtie2 Index
BOWTIE2_CHICKEN	bowtie2	Gallus_gallus	NCBI	GRCg6a	Bowtie\|Bowtie2 Index
BWA_CHICKEN	bwa	Gallus_gallus	NCBI	GRCg6a	Bwa Index
PICARD_CHICKEN	genomes	Gallus_gallus	NCBI	GRCg6a	Picard .dict File
FAIDX_CHICKEN	genomes	Gallus_gallus	NCBI	GRCg6a	Fasta Index .fai File
GALLUS_GALLUS_NCBI_GRCG6A	genomes	Gallus_gallus	NCBI	GRCg6a	Main Directory
GENOME_GALLUS_GALLUS_NCBI_GRCG6A	genomes	Gallus_gallus	NCBI	GRCg6a	Genome Fasta File
CHR_GALLUS_GALLUS_NCBI_GRCG6A	genomes	Gallus_gallus	NCBI	GRCg6a	Chromosome Fasta Files
BOWTIE_GALLUS_GALLUS_NCBI_GRCG6A	bowtie	Gallus_gallus	NCBI	GRCg6a	Bowtie\|Bowtie2 Index
BOWTIE2_GALLUS_GALLUS_NCBI_GRCG6A	bowtie2	Gallus_gallus	NCBI	GRCg6a	Bowtie\|Bowtie2 Index
BWA_GALLUS_GALLUS_NCBI_GRCG6A	bwa	Gallus_gallus	NCBI	GRCg6a	Bwa Index
PICARD_GALLUS_GALLUS_NCBI_GRCG6A	genomes	Gallus_gallus	NCBI	GRCg6a	Picard .dict File
FAIDX_GALLUS_GALLUS_NCBI_GRCG6A	genomes	Gallus_gallus	NCBI	GRCg6a	Fasta Index .fai File
GALLUS_GALLUS_NCBI_BUILD3_1	genomes	Gallus_gallus	NCBI	build3.1	Main Directory
GENOME_GALLUS_GALLUS_NCBI_BUILD3_1	genomes	Gallus_gallus	NCBI	build3.1	Genome Fasta File
CHR_GALLUS_GALLUS_NCBI_BUILD3_1	genomes	Gallus_gallus	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_GALLUS_GALLUS_NCBI_BUILD3_1	bowtie	Gallus_gallus	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_GALLUS_GALLUS_NCBI_BUILD3_1	bowtie2	Gallus_gallus	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_GALLUS_GALLUS_NCBI_BUILD3_1	bwa	Gallus_gallus	NCBI	build3.1	Bwa Index
PICARD_GALLUS_GALLUS_NCBI_BUILD3_1	genomes	Gallus_gallus	NCBI	build3.1	Picard .dict File
FAIDX_GALLUS_GALLUS_NCBI_BUILD3_1	genomes	Gallus_gallus	NCBI	build3.1	Fasta Index .fai File
GALLUS_GALLUS_UCSC_GALGAL4	genomes	Gallus_gallus	UCSC	galGal4	Main Directory
GENOME_GALLUS_GALLUS_UCSC_GALGAL4	genomes	Gallus_gallus	UCSC	galGal4	Genome Fasta File
CHR_GALLUS_GALLUS_UCSC_GALGAL4	genomes	Gallus_gallus	UCSC	galGal4	Chromosome Fasta Files
BOWTIE_GALLUS_GALLUS_UCSC_GALGAL4	bowtie	Gallus_gallus	UCSC	galGal4	Bowtie\|Bowtie2 Index
BOWTIE2_GALLUS_GALLUS_UCSC_GALGAL4	bowtie2	Gallus_gallus	UCSC	galGal4	Bowtie\|Bowtie2 Index
BWA_GALLUS_GALLUS_UCSC_GALGAL4	bwa	Gallus_gallus	UCSC	galGal4	Bwa Index
PICARD_GALLUS_GALLUS_UCSC_GALGAL4	genomes	Gallus_gallus	UCSC	galGal4	Picard .dict File
FAIDX_GALLUS_GALLUS_UCSC_GALGAL4	genomes	Gallus_gallus	UCSC	galGal4	Fasta Index .fai File
GALLUS_GALLUS_UCSC_GALGAL5	genomes	Gallus_gallus	UCSC	galGal5	Main Directory
GENOME_GALLUS_GALLUS_UCSC_GALGAL5	genomes	Gallus_gallus	UCSC	galGal5	Genome Fasta File
CHR_GALLUS_GALLUS_UCSC_GALGAL5	genomes	Gallus_gallus	UCSC	galGal5	Chromosome Fasta Files
BOWTIE_GALLUS_GALLUS_UCSC_GALGAL5	bowtie	Gallus_gallus	UCSC	galGal5	Bowtie\|Bowtie2 Index
BOWTIE2_GALLUS_GALLUS_UCSC_GALGAL5	bowtie2	Gallus_gallus	UCSC	galGal5	Bowtie\|Bowtie2 Index
BWA_GALLUS_GALLUS_UCSC_GALGAL5	bwa	Gallus_gallus	UCSC	galGal5	Bwa Index
PICARD_GALLUS_GALLUS_UCSC_GALGAL5	genomes	Gallus_gallus	UCSC	galGal5	Picard .dict File
FAIDX_GALLUS_GALLUS_UCSC_GALGAL5	genomes	Gallus_gallus	UCSC	galGal5	Fasta Index .fai File
SOYBEAN	genomes	Glycine_max	Ensembl	Gm01	Main Directory
GENOME_SOYBEAN	genomes	Glycine_max	Ensembl	Gm01	Genome Fasta File
CHR_SOYBEAN	genomes	Glycine_max	Ensembl	Gm01	Chromosome Fasta Files
BOWTIE_SOYBEAN	bowtie	Glycine_max	Ensembl	Gm01	Bowtie\|Bowtie2 Index
BOWTIE2_SOYBEAN	bowtie2	Glycine_max	Ensembl	Gm01	Bowtie\|Bowtie2 Index
BWA_SOYBEAN	bwa	Glycine_max	Ensembl	Gm01	Bwa Index
PICARD_SOYBEAN	genomes	Glycine_max	Ensembl	Gm01	Picard .dict File
FAIDX_SOYBEAN	genomes	Glycine_max	Ensembl	Gm01	Fasta Index .fai File
GLYCINE_MAX_ENSEMBL_GM01	genomes	Glycine_max	Ensembl	Gm01	Main Directory
GENOME_GLYCINE_MAX_ENSEMBL_GM01	genomes	Glycine_max	Ensembl	Gm01	Genome Fasta File
CHR_GLYCINE_MAX_ENSEMBL_GM01	genomes	Glycine_max	Ensembl	Gm01	Chromosome Fasta Files
BOWTIE_GLYCINE_MAX_ENSEMBL_GM01	bowtie	Glycine_max	Ensembl	Gm01	Bowtie\|Bowtie2 Index
BOWTIE2_GLYCINE_MAX_ENSEMBL_GM01	bowtie2	Glycine_max	Ensembl	Gm01	Bowtie\|Bowtie2 Index
BWA_GLYCINE_MAX_ENSEMBL_GM01	bwa	Glycine_max	Ensembl	Gm01	Bwa Index
PICARD_GLYCINE_MAX_ENSEMBL_GM01	genomes	Glycine_max	Ensembl	Gm01	Picard .dict File
FAIDX_GLYCINE_MAX_ENSEMBL_GM01	genomes	Glycine_max	Ensembl	Gm01	Fasta Index .fai File
HOMO_SAPIENS_ENSEMBL_GRCH37	genomes	Homo_sapiens	Ensembl	GRCh37	Main Directory
GENOME_HOMO_SAPIENS_ENSEMBL_GRCH37	genomes	Homo_sapiens	Ensembl	GRCh37	Genome Fasta File
CHR_HOMO_SAPIENS_ENSEMBL_GRCH37	genomes	Homo_sapiens	Ensembl	GRCh37	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_ENSEMBL_GRCH37	bowtie	Homo_sapiens	Ensembl	GRCh37	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_ENSEMBL_GRCH37	bowtie2	Homo_sapiens	Ensembl	GRCh37	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_ENSEMBL_GRCH37	bwa	Homo_sapiens	Ensembl	GRCh37	Bwa Index
PICARD_HOMO_SAPIENS_ENSEMBL_GRCH37	genomes	Homo_sapiens	Ensembl	GRCh37	Picard .dict File
FAIDX_HOMO_SAPIENS_ENSEMBL_GRCH37	genomes	Homo_sapiens	Ensembl	GRCh37	Fasta Index .fai File
HUMAN	genomes	Homo_sapiens	NCBI	GRCh38	Main Directory
GENOME_HUMAN	genomes	Homo_sapiens	NCBI	GRCh38	Genome Fasta File
CHR_HUMAN	genomes	Homo_sapiens	NCBI	GRCh38	Chromosome Fasta Files
BOWTIE_HUMAN	bowtie	Homo_sapiens	NCBI	GRCh38	Bowtie\|Bowtie2 Index
BOWTIE2_HUMAN	bowtie2	Homo_sapiens	NCBI	GRCh38	Bowtie\|Bowtie2 Index
BWA_HUMAN	bwa	Homo_sapiens	NCBI	GRCh38	Bwa Index
PICARD_HUMAN	genomes	Homo_sapiens	NCBI	GRCh38	Picard .dict File
FAIDX_HUMAN	genomes	Homo_sapiens	NCBI	GRCh38	Fasta Index .fai File
HOMO_SAPIENS_NCBI_GRCH38	genomes	Homo_sapiens	NCBI	GRCh38	Main Directory
GENOME_HOMO_SAPIENS_NCBI_GRCH38	genomes	Homo_sapiens	NCBI	GRCh38	Genome Fasta File
CHR_HOMO_SAPIENS_NCBI_GRCH38	genomes	Homo_sapiens	NCBI	GRCh38	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_NCBI_GRCH38	bowtie	Homo_sapiens	NCBI	GRCh38	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_NCBI_GRCH38	bowtie2	Homo_sapiens	NCBI	GRCh38	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_NCBI_GRCH38	bwa	Homo_sapiens	NCBI	GRCh38	Bwa Index
PICARD_HOMO_SAPIENS_NCBI_GRCH38	genomes	Homo_sapiens	NCBI	GRCh38	Picard .dict File
FAIDX_HOMO_SAPIENS_NCBI_GRCH38	genomes	Homo_sapiens	NCBI	GRCh38	Fasta Index .fai File
HOMO_SAPIENS_NCBI_BUILD37_2	genomes	Homo_sapiens	NCBI	build37.2	Main Directory
GENOME_HOMO_SAPIENS_NCBI_BUILD37_2	genomes	Homo_sapiens	NCBI	build37.2	Genome Fasta File
CHR_HOMO_SAPIENS_NCBI_BUILD37_2	genomes	Homo_sapiens	NCBI	build37.2	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_NCBI_BUILD37_2	bowtie	Homo_sapiens	NCBI	build37.2	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_NCBI_BUILD37_2	bowtie2	Homo_sapiens	NCBI	build37.2	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_NCBI_BUILD37_2	bwa	Homo_sapiens	NCBI	build37.2	Bwa Index
PICARD_HOMO_SAPIENS_NCBI_BUILD37_2	genomes	Homo_sapiens	NCBI	build37.2	Picard .dict File
FAIDX_HOMO_SAPIENS_NCBI_BUILD37_2	genomes	Homo_sapiens	NCBI	build37.2	Fasta Index .fai File
HOMO_SAPIENS_UCSC_HG18	genomes	Homo_sapiens	UCSC	hg18	Main Directory
GENOME_HOMO_SAPIENS_UCSC_HG18	genomes	Homo_sapiens	UCSC	hg18	Genome Fasta File
CHR_HOMO_SAPIENS_UCSC_HG18	genomes	Homo_sapiens	UCSC	hg18	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_UCSC_HG18	bowtie	Homo_sapiens	UCSC	hg18	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_UCSC_HG18	bowtie2	Homo_sapiens	UCSC	hg18	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_UCSC_HG18	bwa	Homo_sapiens	UCSC	hg18	Bwa Index
PICARD_HOMO_SAPIENS_UCSC_HG18	genomes	Homo_sapiens	UCSC	hg18	Picard .dict File
FAIDX_HOMO_SAPIENS_UCSC_HG18	genomes	Homo_sapiens	UCSC	hg18	Fasta Index .fai File
HOMO_SAPIENS_UCSC_HG19	genomes	Homo_sapiens	UCSC	hg19	Main Directory
GENOME_HOMO_SAPIENS_UCSC_HG19	genomes	Homo_sapiens	UCSC	hg19	Genome Fasta File
CHR_HOMO_SAPIENS_UCSC_HG19	genomes	Homo_sapiens	UCSC	hg19	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_UCSC_HG19	bowtie	Homo_sapiens	UCSC	hg19	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_UCSC_HG19	bowtie2	Homo_sapiens	UCSC	hg19	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_UCSC_HG19	bwa	Homo_sapiens	UCSC	hg19	Bwa Index
PICARD_HOMO_SAPIENS_UCSC_HG19	genomes	Homo_sapiens	UCSC	hg19	Picard .dict File
FAIDX_HOMO_SAPIENS_UCSC_HG19	genomes	Homo_sapiens	UCSC	hg19	Fasta Index .fai File
HOMO_SAPIENS_UCSC_HG38	genomes	Homo_sapiens	UCSC	hg38	Main Directory
GENOME_HOMO_SAPIENS_UCSC_HG38	genomes	Homo_sapiens	UCSC	hg38	Genome Fasta File
CHR_HOMO_SAPIENS_UCSC_HG38	genomes	Homo_sapiens	UCSC	hg38	Chromosome Fasta Files
BOWTIE_HOMO_SAPIENS_UCSC_HG38	bowtie	Homo_sapiens	UCSC	hg38	Bowtie\|Bowtie2 Index
BOWTIE2_HOMO_SAPIENS_UCSC_HG38	bowtie2	Homo_sapiens	UCSC	hg38	Bowtie\|Bowtie2 Index
BWA_HOMO_SAPIENS_UCSC_HG38	bwa	Homo_sapiens	UCSC	hg38	Bwa Index
PICARD_HOMO_SAPIENS_UCSC_HG38	genomes	Homo_sapiens	UCSC	hg38	Picard .dict File
FAIDX_HOMO_SAPIENS_UCSC_HG38	genomes	Homo_sapiens	UCSC	hg38	Fasta Index .fai File
SQUIRREL	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Main Directory
GENOME_SQUIRREL	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Genome Fasta File
CHR_SQUIRREL	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Chromosome Fasta Files
BOWTIE_SQUIRREL	bowtie	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bowtie\|Bowtie2 Index
BOWTIE2_SQUIRREL	bowtie2	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bowtie\|Bowtie2 Index
BWA_SQUIRREL	bwa	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bwa Index
PICARD_SQUIRREL	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Picard .dict File
FAIDX_SQUIRREL	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Fasta Index .fai File
ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Main Directory
GENOME_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Genome Fasta File
CHR_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Chromosome Fasta Files
BOWTIE_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	bowtie	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bowtie\|Bowtie2 Index
BOWTIE2_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	bowtie2	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bowtie\|Bowtie2 Index
BWA_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	bwa	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Bwa Index
PICARD_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Picard .dict File
FAIDX_ICTIDOMYS_TRIDECEMLINEATUS_NCBI_SPETRI2_0	genomes	Ictidomys_tridecemlineatus	NCBI	SpeTri2.0	Fasta Index .fai File
RHESUS_MACAQUE	genomes	Macaca_mulatta	Ensembl	Mmul_1	Main Directory
GENOME_RHESUS_MACAQUE	genomes	Macaca_mulatta	Ensembl	Mmul_1	Genome Fasta File
CHR_RHESUS_MACAQUE	genomes	Macaca_mulatta	Ensembl	Mmul_1	Chromosome Fasta Files
BOWTIE_RHESUS_MACAQUE	bowtie	Macaca_mulatta	Ensembl	Mmul_1	Bowtie\|Bowtie2 Index
BOWTIE2_RHESUS_MACAQUE	bowtie2	Macaca_mulatta	Ensembl	Mmul_1	Bowtie\|Bowtie2 Index
BWA_RHESUS_MACAQUE	bwa	Macaca_mulatta	Ensembl	Mmul_1	Bwa Index
PICARD_RHESUS_MACAQUE	genomes	Macaca_mulatta	Ensembl	Mmul_1	Picard .dict File
FAIDX_RHESUS_MACAQUE	genomes	Macaca_mulatta	Ensembl	Mmul_1	Fasta Index .fai File
MACACA_MULATTA_ENSEMBL_MMUL_1	genomes	Macaca_mulatta	Ensembl	Mmul_1	Main Directory
GENOME_MACACA_MULATTA_ENSEMBL_MMUL_1	genomes	Macaca_mulatta	Ensembl	Mmul_1	Genome Fasta File
CHR_MACACA_MULATTA_ENSEMBL_MMUL_1	genomes	Macaca_mulatta	Ensembl	Mmul_1	Chromosome Fasta Files
BOWTIE_MACACA_MULATTA_ENSEMBL_MMUL_1	bowtie	Macaca_mulatta	Ensembl	Mmul_1	Bowtie\|Bowtie2 Index
BOWTIE2_MACACA_MULATTA_ENSEMBL_MMUL_1	bowtie2	Macaca_mulatta	Ensembl	Mmul_1	Bowtie\|Bowtie2 Index
BWA_MACACA_MULATTA_ENSEMBL_MMUL_1	bwa	Macaca_mulatta	Ensembl	Mmul_1	Bwa Index
PICARD_MACACA_MULATTA_ENSEMBL_MMUL_1	genomes	Macaca_mulatta	Ensembl	Mmul_1	Picard .dict File
FAIDX_MACACA_MULATTA_ENSEMBL_MMUL_1	genomes	Macaca_mulatta	Ensembl	Mmul_1	Fasta Index .fai File
MUS_MUSCULUS_ENSEMBL_GRCM39	genomes	Mus_musculus	Ensembl	GRCm39	Main Directory
GENOME_MUS_MUSCULUS_ENSEMBL_GRCM39	genomes	Mus_musculus	Ensembl	GRCm39	Genome Fasta File
CHR_MUS_MUSCULUS_ENSEMBL_GRCM39	genomes	Mus_musculus	Ensembl	GRCm39	Chromosome Fasta Files
BOWTIE_MUS_MUSCULUS_ENSEMBL_GRCM39	bowtie	Mus_musculus	Ensembl	GRCm39	Bowtie\|Bowtie2 Index
BOWTIE2_MUS_MUSCULUS_ENSEMBL_GRCM39	bowtie2	Mus_musculus	Ensembl	GRCm39	Bowtie\|Bowtie2 Index
BWA_MUS_MUSCULUS_ENSEMBL_GRCM39	bwa	Mus_musculus	Ensembl	GRCm39	Bwa Index
PICARD_MUS_MUSCULUS_ENSEMBL_GRCM39	genomes	Mus_musculus	Ensembl	GRCm39	Picard .dict File
FAIDX_MUS_MUSCULUS_ENSEMBL_GRCM39	genomes	Mus_musculus	Ensembl	GRCm39	Fasta Index .fai File
MOUSE	genomes	Mus_musculus	NCBI	GRCm38	Main Directory
GENOME_MOUSE	genomes	Mus_musculus	NCBI	GRCm38	Genome Fasta File
CHR_MOUSE	genomes	Mus_musculus	NCBI	GRCm38	Chromosome Fasta Files
BOWTIE_MOUSE	bowtie	Mus_musculus	NCBI	GRCm38	Bowtie\|Bowtie2 Index
BOWTIE2_MOUSE	bowtie2	Mus_musculus	NCBI	GRCm38	Bowtie\|Bowtie2 Index
BWA_MOUSE	bwa	Mus_musculus	NCBI	GRCm38	Bwa Index
PICARD_MOUSE	genomes	Mus_musculus	NCBI	GRCm38	Picard .dict File
FAIDX_MOUSE	genomes	Mus_musculus	NCBI	GRCm38	Fasta Index .fai File
MUS_MUSCULUS_NCBI_GRCM38	genomes	Mus_musculus	NCBI	GRCm38	Main Directory
GENOME_MUS_MUSCULUS_NCBI_GRCM38	genomes	Mus_musculus	NCBI	GRCm38	Genome Fasta File
CHR_MUS_MUSCULUS_NCBI_GRCM38	genomes	Mus_musculus	NCBI	GRCm38	Chromosome Fasta Files
BOWTIE_MUS_MUSCULUS_NCBI_GRCM38	bowtie	Mus_musculus	NCBI	GRCm38	Bowtie\|Bowtie2 Index
BOWTIE2_MUS_MUSCULUS_NCBI_GRCM38	bowtie2	Mus_musculus	NCBI	GRCm38	Bowtie\|Bowtie2 Index
BWA_MUS_MUSCULUS_NCBI_GRCM38	bwa	Mus_musculus	NCBI	GRCm38	Bwa Index
PICARD_MUS_MUSCULUS_NCBI_GRCM38	genomes	Mus_musculus	NCBI	GRCm38	Picard .dict File
FAIDX_MUS_MUSCULUS_NCBI_GRCM38	genomes	Mus_musculus	NCBI	GRCm38	Fasta Index .fai File
MUS_MUSCULUS_UCSC_MM10	genomes	Mus_musculus	UCSC	mm10	Main Directory
GENOME_MUS_MUSCULUS_UCSC_MM10	genomes	Mus_musculus	UCSC	mm10	Genome Fasta File
CHR_MUS_MUSCULUS_UCSC_MM10	genomes	Mus_musculus	UCSC	mm10	Chromosome Fasta Files
BOWTIE_MUS_MUSCULUS_UCSC_MM10	bowtie	Mus_musculus	UCSC	mm10	Bowtie\|Bowtie2 Index
BOWTIE2_MUS_MUSCULUS_UCSC_MM10	bowtie2	Mus_musculus	UCSC	mm10	Bowtie\|Bowtie2 Index
BWA_MUS_MUSCULUS_UCSC_MM10	bwa	Mus_musculus	UCSC	mm10	Bwa Index
PICARD_MUS_MUSCULUS_UCSC_MM10	genomes	Mus_musculus	UCSC	mm10	Picard .dict File
FAIDX_MUS_MUSCULUS_UCSC_MM10	genomes	Mus_musculus	UCSC	mm10	Fasta Index .fai File
MUS_MUSCULUS_UCSC_MM9	genomes	Mus_musculus	UCSC	mm9	Main Directory
GENOME_MUS_MUSCULUS_UCSC_MM9	genomes	Mus_musculus	UCSC	mm9	Genome Fasta File
CHR_MUS_MUSCULUS_UCSC_MM9	genomes	Mus_musculus	UCSC	mm9	Chromosome Fasta Files
BOWTIE_MUS_MUSCULUS_UCSC_MM9	bowtie	Mus_musculus	UCSC	mm9	Bowtie\|Bowtie2 Index
BOWTIE2_MUS_MUSCULUS_UCSC_MM9	bowtie2	Mus_musculus	UCSC	mm9	Bowtie\|Bowtie2 Index
BWA_MUS_MUSCULUS_UCSC_MM9	bwa	Mus_musculus	UCSC	mm9	Bwa Index
PICARD_MUS_MUSCULUS_UCSC_MM9	genomes	Mus_musculus	UCSC	mm9	Picard .dict File
FAIDX_MUS_MUSCULUS_UCSC_MM9	genomes	Mus_musculus	UCSC	mm9	Fasta Index .fai File
MYCOBACTERIUM_TUBERCULOSIS_H37RV	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Main Directory
GENOME_MYCOBACTERIUM_TUBERCULOSIS_H37RV	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Genome Fasta File
CHR_MYCOBACTERIUM_TUBERCULOSIS_H37RV	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Chromosome Fasta Files
BOWTIE_MYCOBACTERIUM_TUBERCULOSIS_H37RV	bowtie	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bowtie\|Bowtie2 Index
BOWTIE2_MYCOBACTERIUM_TUBERCULOSIS_H37RV	bowtie2	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bowtie\|Bowtie2 Index
BWA_MYCOBACTERIUM_TUBERCULOSIS_H37RV	bwa	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bwa Index
PICARD_MYCOBACTERIUM_TUBERCULOSIS_H37RV	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Picard .dict File
FAIDX_MYCOBACTERIUM_TUBERCULOSIS_H37RV	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Fasta Index .fai File
MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Main Directory
GENOME_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Genome Fasta File
CHR_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Chromosome Fasta Files
BOWTIE_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	bowtie	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bowtie\|Bowtie2 Index
BOWTIE2_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	bowtie2	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bowtie\|Bowtie2 Index
BWA_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	bwa	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Bwa Index
PICARD_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Picard .dict File
FAIDX_MYCOBACTERIUM_TUBERCULOSIS_H37RV_NCBI_2001_09_07	genomes	Mycobacterium_tuberculosis_H37RV	NCBI	2001-09-07	Fasta Index .fai File
OAR_RAMBOUILLET	genomes	Oar_rambouillet	NCBI	v2.0	Main Directory
GENOME_OAR_RAMBOUILLET	genomes	Oar_rambouillet	NCBI	v2.0	Genome Fasta File
CHR_OAR_RAMBOUILLET	genomes	Oar_rambouillet	NCBI	v2.0	Chromosome Fasta Files
BOWTIE_OAR_RAMBOUILLET	bowtie	Oar_rambouillet	NCBI	v2.0	Bowtie\|Bowtie2 Index
BOWTIE2_OAR_RAMBOUILLET	bowtie2	Oar_rambouillet	NCBI	v2.0	Bowtie\|Bowtie2 Index
BWA_OAR_RAMBOUILLET	bwa	Oar_rambouillet	NCBI	v2.0	Bwa Index
PICARD_OAR_RAMBOUILLET	genomes	Oar_rambouillet	NCBI	v2.0	Picard .dict File
FAIDX_OAR_RAMBOUILLET	genomes	Oar_rambouillet	NCBI	v2.0	Fasta Index .fai File
OAR_RAMBOUILLET_NCBI_V2_0	genomes	Oar_rambouillet	NCBI	v2.0	Main Directory
GENOME_OAR_RAMBOUILLET_NCBI_V2_0	genomes	Oar_rambouillet	NCBI	v2.0	Genome Fasta File
CHR_OAR_RAMBOUILLET_NCBI_V2_0	genomes	Oar_rambouillet	NCBI	v2.0	Chromosome Fasta Files
BOWTIE_OAR_RAMBOUILLET_NCBI_V2_0	bowtie	Oar_rambouillet	NCBI	v2.0	Bowtie\|Bowtie2 Index
BOWTIE2_OAR_RAMBOUILLET_NCBI_V2_0	bowtie2	Oar_rambouillet	NCBI	v2.0	Bowtie\|Bowtie2 Index
BWA_OAR_RAMBOUILLET_NCBI_V2_0	bwa	Oar_rambouillet	NCBI	v2.0	Bwa Index
PICARD_OAR_RAMBOUILLET_NCBI_V2_0	genomes	Oar_rambouillet	NCBI	v2.0	Picard .dict File
FAIDX_OAR_RAMBOUILLET_NCBI_V2_0	genomes	Oar_rambouillet	NCBI	v2.0	Fasta Index .fai File
RICE	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Main Directory
GENOME_RICE	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Genome Fasta File
CHR_RICE	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Chromosome Fasta Files
BOWTIE_RICE	bowtie	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bowtie\|Bowtie2 Index
BOWTIE2_RICE	bowtie2	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bowtie\|Bowtie2 Index
BWA_RICE	bwa	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bwa Index
PICARD_RICE	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Picard .dict File
FAIDX_RICE	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Fasta Index .fai File
ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Main Directory
GENOME_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Genome Fasta File
CHR_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Chromosome Fasta Files
BOWTIE_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	bowtie	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bowtie\|Bowtie2 Index
BOWTIE2_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	bowtie2	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bowtie\|Bowtie2 Index
BWA_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	bwa	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Bwa Index
PICARD_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Picard .dict File
FAIDX_ORYZA_SATIVA_JAPONICA_ENSEMBL_IRGSP_1_0	genomes	Oryza_sativa_japonica	Ensembl	IRGSP-1.0	Fasta Index .fai File
SHEEP	genomes	Ovis_aries	NCBI	Oar3_1	Main Directory
GENOME_SHEEP	genomes	Ovis_aries	NCBI	Oar3_1	Genome Fasta File
CHR_SHEEP	genomes	Ovis_aries	NCBI	Oar3_1	Chromosome Fasta Files
BOWTIE_SHEEP	bowtie	Ovis_aries	NCBI	Oar3_1	Bowtie\|Bowtie2 Index
BOWTIE2_SHEEP	bowtie2	Ovis_aries	NCBI	Oar3_1	Bowtie\|Bowtie2 Index
BWA_SHEEP	bwa	Ovis_aries	NCBI	Oar3_1	Bwa Index
PICARD_SHEEP	genomes	Ovis_aries	NCBI	Oar3_1	Picard .dict File
FAIDX_SHEEP	genomes	Ovis_aries	NCBI	Oar3_1	Fasta Index .fai File
OVIS_ARIES_NCBI_OAR3_1	genomes	Ovis_aries	NCBI	Oar3_1	Main Directory
GENOME_OVIS_ARIES_NCBI_OAR3_1	genomes	Ovis_aries	NCBI	Oar3_1	Genome Fasta File
CHR_OVIS_ARIES_NCBI_OAR3_1	genomes	Ovis_aries	NCBI	Oar3_1	Chromosome Fasta Files
BOWTIE_OVIS_ARIES_NCBI_OAR3_1	bowtie	Ovis_aries	NCBI	Oar3_1	Bowtie\|Bowtie2 Index
BOWTIE2_OVIS_ARIES_NCBI_OAR3_1	bowtie2	Ovis_aries	NCBI	Oar3_1	Bowtie\|Bowtie2 Index
BWA_OVIS_ARIES_NCBI_OAR3_1	bwa	Ovis_aries	NCBI	Oar3_1	Bwa Index
PICARD_OVIS_ARIES_NCBI_OAR3_1	genomes	Ovis_aries	NCBI	Oar3_1	Picard .dict File
FAIDX_OVIS_ARIES_NCBI_OAR3_1	genomes	Ovis_aries	NCBI	Oar3_1	Fasta Index .fai File
OVIS_ARIES_NCBI_OAR4_0	genomes	Ovis_aries	NCBI	Oar4_0	Main Directory
GENOME_OVIS_ARIES_NCBI_OAR4_0	genomes	Ovis_aries	NCBI	Oar4_0	Genome Fasta File
CHR_OVIS_ARIES_NCBI_OAR4_0	genomes	Ovis_aries	NCBI	Oar4_0	Chromosome Fasta Files
BOWTIE_OVIS_ARIES_NCBI_OAR4_0	bowtie	Ovis_aries	NCBI	Oar4_0	Bowtie\|Bowtie2 Index
BOWTIE2_OVIS_ARIES_NCBI_OAR4_0	bowtie2	Ovis_aries	NCBI	Oar4_0	Bowtie\|Bowtie2 Index
BWA_OVIS_ARIES_NCBI_OAR4_0	bwa	Ovis_aries	NCBI	Oar4_0	Bwa Index
PICARD_OVIS_ARIES_NCBI_OAR4_0	genomes	Ovis_aries	NCBI	Oar4_0	Picard .dict File
FAIDX_OVIS_ARIES_NCBI_OAR4_0	genomes	Ovis_aries	NCBI	Oar4_0	Fasta Index .fai File
OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	genomes	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Main Directory
GENOME_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	genomes	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Genome Fasta File
CHR_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	genomes	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Chromosome Fasta Files
BOWTIE_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	bowtie	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Bowtie\|Bowtie2 Index
BOWTIE2_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	bowtie2	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Bowtie\|Bowtie2 Index
BWA_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	bwa	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Bwa Index
PICARD_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	genomes	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Picard .dict File
FAIDX_OVIS_ARIES_NCBI_OAR_RAMBOUILLET_V1_0	genomes	Ovis_aries	NCBI	Oar_rambouillet_v1.0	Fasta Index .fai File
CHIMPANZEE	genomes	Pan_troglodytes	NCBI	build3.1	Main Directory
GENOME_CHIMPANZEE	genomes	Pan_troglodytes	NCBI	build3.1	Genome Fasta File
CHR_CHIMPANZEE	genomes	Pan_troglodytes	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_CHIMPANZEE	bowtie	Pan_troglodytes	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_CHIMPANZEE	bowtie2	Pan_troglodytes	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_CHIMPANZEE	bwa	Pan_troglodytes	NCBI	build3.1	Bwa Index
PICARD_CHIMPANZEE	genomes	Pan_troglodytes	NCBI	build3.1	Picard .dict File
FAIDX_CHIMPANZEE	genomes	Pan_troglodytes	NCBI	build3.1	Fasta Index .fai File
PAN_TROGLODYTES_NCBI_BUILD3_1	genomes	Pan_troglodytes	NCBI	build3.1	Main Directory
GENOME_PAN_TROGLODYTES_NCBI_BUILD3_1	genomes	Pan_troglodytes	NCBI	build3.1	Genome Fasta File
CHR_PAN_TROGLODYTES_NCBI_BUILD3_1	genomes	Pan_troglodytes	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_PAN_TROGLODYTES_NCBI_BUILD3_1	bowtie	Pan_troglodytes	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_PAN_TROGLODYTES_NCBI_BUILD3_1	bowtie2	Pan_troglodytes	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_PAN_TROGLODYTES_NCBI_BUILD3_1	bwa	Pan_troglodytes	NCBI	build3.1	Bwa Index
PICARD_PAN_TROGLODYTES_NCBI_BUILD3_1	genomes	Pan_troglodytes	NCBI	build3.1	Picard .dict File
FAIDX_PAN_TROGLODYTES_NCBI_BUILD3_1	genomes	Pan_troglodytes	NCBI	build3.1	Fasta Index .fai File
PHIX	genomes	PhiX	Illumina	RTA	Main Directory
GENOME_PHIX	genomes	PhiX	Illumina	RTA	Genome Fasta File
CHR_PHIX	genomes	PhiX	Illumina	RTA	Chromosome Fasta Files
BOWTIE_PHIX	bowtie	PhiX	Illumina	RTA	Bowtie\|Bowtie2 Index
BOWTIE2_PHIX	bowtie2	PhiX	Illumina	RTA	Bowtie\|Bowtie2 Index
BWA_PHIX	bwa	PhiX	Illumina	RTA	Bwa Index
PICARD_PHIX	genomes	PhiX	Illumina	RTA	Picard .dict File
FAIDX_PHIX	genomes	PhiX	Illumina	RTA	Fasta Index .fai File
PHIX_ILLUMINA_RTA	genomes	PhiX	Illumina	RTA	Main Directory
GENOME_PHIX_ILLUMINA_RTA	genomes	PhiX	Illumina	RTA	Genome Fasta File
CHR_PHIX_ILLUMINA_RTA	genomes	PhiX	Illumina	RTA	Chromosome Fasta Files
BOWTIE_PHIX_ILLUMINA_RTA	bowtie	PhiX	Illumina	RTA	Bowtie\|Bowtie2 Index
BOWTIE2_PHIX_ILLUMINA_RTA	bowtie2	PhiX	Illumina	RTA	Bowtie\|Bowtie2 Index
BWA_PHIX_ILLUMINA_RTA	bwa	PhiX	Illumina	RTA	Bwa Index
PICARD_PHIX_ILLUMINA_RTA	genomes	PhiX	Illumina	RTA	Picard .dict File
FAIDX_PHIX_ILLUMINA_RTA	genomes	PhiX	Illumina	RTA	Fasta Index .fai File
PSEUDOMONAS_AERUGINOSA_PAO1	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Main Directory
GENOME_PSEUDOMONAS_AERUGINOSA_PAO1	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Genome Fasta File
CHR_PSEUDOMONAS_AERUGINOSA_PAO1	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Chromosome Fasta Files
BOWTIE_PSEUDOMONAS_AERUGINOSA_PAO1	bowtie	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bowtie\|Bowtie2 Index
BOWTIE2_PSEUDOMONAS_AERUGINOSA_PAO1	bowtie2	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bowtie\|Bowtie2 Index
BWA_PSEUDOMONAS_AERUGINOSA_PAO1	bwa	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bwa Index
PICARD_PSEUDOMONAS_AERUGINOSA_PAO1	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Picard .dict File
FAIDX_PSEUDOMONAS_AERUGINOSA_PAO1	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Fasta Index .fai File
PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Main Directory
GENOME_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Genome Fasta File
CHR_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Chromosome Fasta Files
BOWTIE_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	bowtie	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bowtie\|Bowtie2 Index
BOWTIE2_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	bowtie2	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bowtie\|Bowtie2 Index
BWA_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	bwa	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Bwa Index
PICARD_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Picard .dict File
FAIDX_PSEUDOMONAS_AERUGINOSA_PAO1_NCBI_2000_09_13	genomes	Pseudomonas_aeruginosa_PAO1	NCBI	2000-09-13	Fasta Index .fai File
RAT	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Main Directory
GENOME_RAT	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Genome Fasta File
CHR_RAT	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Chromosome Fasta Files
BOWTIE_RAT	bowtie	Rattus_norvegicus	NCBI	Rnor_5.0	Bowtie\|Bowtie2 Index
BOWTIE2_RAT	bowtie2	Rattus_norvegicus	NCBI	Rnor_5.0	Bowtie\|Bowtie2 Index
BWA_RAT	bwa	Rattus_norvegicus	NCBI	Rnor_5.0	Bwa Index
PICARD_RAT	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Picard .dict File
FAIDX_RAT	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Fasta Index .fai File
RATTUS_NORVEGICUS_NCBI_RNOR_5_0	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Main Directory
GENOME_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Genome Fasta File
CHR_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Chromosome Fasta Files
BOWTIE_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	bowtie	Rattus_norvegicus	NCBI	Rnor_5.0	Bowtie\|Bowtie2 Index
BOWTIE2_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	bowtie2	Rattus_norvegicus	NCBI	Rnor_5.0	Bowtie\|Bowtie2 Index
BWA_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	bwa	Rattus_norvegicus	NCBI	Rnor_5.0	Bwa Index
PICARD_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Picard .dict File
FAIDX_RATTUS_NORVEGICUS_NCBI_RNOR_5_0	genomes	Rattus_norvegicus	NCBI	Rnor_5.0	Fasta Index .fai File
RATTUS_NORVEGICUS_NCBI_RNOR_6_0	genomes	Rattus_norvegicus	NCBI	Rnor_6.0	Main Directory
GENOME_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	genomes	Rattus_norvegicus	NCBI	Rnor_6.0	Genome Fasta File
CHR_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	genomes	Rattus_norvegicus	NCBI	Rnor_6.0	Chromosome Fasta Files
BOWTIE_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	bowtie	Rattus_norvegicus	NCBI	Rnor_6.0	Bowtie\|Bowtie2 Index
BOWTIE2_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	bowtie2	Rattus_norvegicus	NCBI	Rnor_6.0	Bowtie\|Bowtie2 Index
BWA_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	bwa	Rattus_norvegicus	NCBI	Rnor_6.0	Bwa Index
PICARD_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	genomes	Rattus_norvegicus	NCBI	Rnor_6.0	Picard .dict File
FAIDX_RATTUS_NORVEGICUS_NCBI_RNOR_6_0	genomes	Rattus_norvegicus	NCBI	Rnor_6.0	Fasta Index .fai File
YEAST	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Main Directory
GENOME_YEAST	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Genome Fasta File
CHR_YEAST	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_YEAST	bowtie	Saccharomyces_cerevisiae	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_YEAST	bowtie2	Saccharomyces_cerevisiae	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_YEAST	bwa	Saccharomyces_cerevisiae	NCBI	build3.1	Bwa Index
PICARD_YEAST	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Picard .dict File
FAIDX_YEAST	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Fasta Index .fai File
SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Main Directory
GENOME_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Genome Fasta File
CHR_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Chromosome Fasta Files
BOWTIE_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	bowtie	Saccharomyces_cerevisiae	NCBI	build3.1	Bowtie\|Bowtie2 Index
BOWTIE2_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	bowtie2	Saccharomyces_cerevisiae	NCBI	build3.1	Bowtie\|Bowtie2 Index
BWA_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	bwa	Saccharomyces_cerevisiae	NCBI	build3.1	Bwa Index
PICARD_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Picard .dict File
FAIDX_SACCHAROMYCES_CEREVISIAE_NCBI_BUILD3_1	genomes	Saccharomyces_cerevisiae	NCBI	build3.1	Fasta Index .fai File
SCIURUS_CAROLINENSIS	genomes	Sciurus_carolinensis	NCBI	1.2	Main Directory
GENOME_SCIURUS_CAROLINENSIS	genomes	Sciurus_carolinensis	NCBI	1.2	Genome Fasta File
CHR_SCIURUS_CAROLINENSIS	genomes	Sciurus_carolinensis	NCBI	1.2	Chromosome Fasta Files
BOWTIE_SCIURUS_CAROLINENSIS	bowtie	Sciurus_carolinensis	NCBI	1.2	Bowtie\|Bowtie2 Index
BOWTIE2_SCIURUS_CAROLINENSIS	bowtie2	Sciurus_carolinensis	NCBI	1.2	Bowtie\|Bowtie2 Index
BWA_SCIURUS_CAROLINENSIS	bwa	Sciurus_carolinensis	NCBI	1.2	Bwa Index
PICARD_SCIURUS_CAROLINENSIS	genomes	Sciurus_carolinensis	NCBI	1.2	Picard .dict File
FAIDX_SCIURUS_CAROLINENSIS	genomes	Sciurus_carolinensis	NCBI	1.2	Fasta Index .fai File
SCIURUS_CAROLINENSIS_NCBI_1_2	genomes	Sciurus_carolinensis	NCBI	1.2	Main Directory
GENOME_SCIURUS_CAROLINENSIS_NCBI_1_2	genomes	Sciurus_carolinensis	NCBI	1.2	Genome Fasta File
CHR_SCIURUS_CAROLINENSIS_NCBI_1_2	genomes	Sciurus_carolinensis	NCBI	1.2	Chromosome Fasta Files
BOWTIE_SCIURUS_CAROLINENSIS_NCBI_1_2	bowtie	Sciurus_carolinensis	NCBI	1.2	Bowtie\|Bowtie2 Index
BOWTIE2_SCIURUS_CAROLINENSIS_NCBI_1_2	bowtie2	Sciurus_carolinensis	NCBI	1.2	Bowtie\|Bowtie2 Index
BWA_SCIURUS_CAROLINENSIS_NCBI_1_2	bwa	Sciurus_carolinensis	NCBI	1.2	Bwa Index
PICARD_SCIURUS_CAROLINENSIS_NCBI_1_2	genomes	Sciurus_carolinensis	NCBI	1.2	Picard .dict File
FAIDX_SCIURUS_CAROLINENSIS_NCBI_1_2	genomes	Sciurus_carolinensis	NCBI	1.2	Fasta Index .fai File
SQUIRREL	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Main Directory
GENOME_SQUIRREL	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Genome Fasta File
CHR_SQUIRREL	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Chromosome Fasta Files
BOWTIE_SQUIRREL	bowtie	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bowtie\|Bowtie2 Index
BOWTIE2_SQUIRREL	bowtie2	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bowtie\|Bowtie2 Index
BWA_SQUIRREL	bwa	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bwa Index
PICARD_SQUIRREL	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Picard .dict File
FAIDX_SQUIRREL	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Fasta Index .fai File
SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Main Directory
GENOME_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Genome Fasta File
CHR_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Chromosome Fasta Files
BOWTIE_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	bowtie	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bowtie\|Bowtie2 Index
BOWTIE2_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	bowtie2	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bowtie\|Bowtie2 Index
BWA_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	bwa	Sciurus_vulgaris	Ensembl	mSciVul1.1	Bwa Index
PICARD_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Picard .dict File
FAIDX_SCIURUS_VULGARIS_ENSEMBL_MSCIVUL1_1	genomes	Sciurus_vulgaris	Ensembl	mSciVul1.1	Fasta Index .fai File
SORGHUM	genomes	Sorghum_bicolor	Ensembl	Sbi1	Main Directory
GENOME_SORGHUM	genomes	Sorghum_bicolor	Ensembl	Sbi1	Genome Fasta File
CHR_SORGHUM	genomes	Sorghum_bicolor	Ensembl	Sbi1	Chromosome Fasta Files
BOWTIE_SORGHUM	bowtie	Sorghum_bicolor	Ensembl	Sbi1	Bowtie\|Bowtie2 Index
BOWTIE2_SORGHUM	bowtie2	Sorghum_bicolor	Ensembl	Sbi1	Bowtie\|Bowtie2 Index
BWA_SORGHUM	bwa	Sorghum_bicolor	Ensembl	Sbi1	Bwa Index
PICARD_SORGHUM	genomes	Sorghum_bicolor	Ensembl	Sbi1	Picard .dict File
FAIDX_SORGHUM	genomes	Sorghum_bicolor	Ensembl	Sbi1	Fasta Index .fai File
SORGHUM_BICOLOR_ENSEMBL_SBI1	genomes	Sorghum_bicolor	Ensembl	Sbi1	Main Directory
GENOME_SORGHUM_BICOLOR_ENSEMBL_SBI1	genomes	Sorghum_bicolor	Ensembl	Sbi1	Genome Fasta File
CHR_SORGHUM_BICOLOR_ENSEMBL_SBI1	genomes	Sorghum_bicolor	Ensembl	Sbi1	Chromosome Fasta Files
BOWTIE_SORGHUM_BICOLOR_ENSEMBL_SBI1	bowtie	Sorghum_bicolor	Ensembl	Sbi1	Bowtie\|Bowtie2 Index
BOWTIE2_SORGHUM_BICOLOR_ENSEMBL_SBI1	bowtie2	Sorghum_bicolor	Ensembl	Sbi1	Bowtie\|Bowtie2 Index
BWA_SORGHUM_BICOLOR_ENSEMBL_SBI1	bwa	Sorghum_bicolor	Ensembl	Sbi1	Bwa Index
PICARD_SORGHUM_BICOLOR_ENSEMBL_SBI1	genomes	Sorghum_bicolor	Ensembl	Sbi1	Picard .dict File
FAIDX_SORGHUM_BICOLOR_ENSEMBL_SBI1	genomes	Sorghum_bicolor	Ensembl	Sbi1	Fasta Index .fai File
STAPHYLOCOCCUS_AUREUS_NCTC_8325	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Main Directory
GENOME_STAPHYLOCOCCUS_AUREUS_NCTC_8325	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Genome Fasta File
CHR_STAPHYLOCOCCUS_AUREUS_NCTC_8325	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Chromosome Fasta Files
BOWTIE_STAPHYLOCOCCUS_AUREUS_NCTC_8325	bowtie	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bowtie\|Bowtie2 Index
BOWTIE2_STAPHYLOCOCCUS_AUREUS_NCTC_8325	bowtie2	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bowtie\|Bowtie2 Index
BWA_STAPHYLOCOCCUS_AUREUS_NCTC_8325	bwa	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bwa Index
PICARD_STAPHYLOCOCCUS_AUREUS_NCTC_8325	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Picard .dict File
FAIDX_STAPHYLOCOCCUS_AUREUS_NCTC_8325	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Fasta Index .fai File
STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Main Directory
GENOME_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Genome Fasta File
CHR_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Chromosome Fasta Files
BOWTIE_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	bowtie	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bowtie\|Bowtie2 Index
BOWTIE2_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	bowtie2	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bowtie\|Bowtie2 Index
BWA_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	bwa	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Bwa Index
PICARD_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Picard .dict File
FAIDX_STAPHYLOCOCCUS_AUREUS_NCTC_8325_NCBI_2006_02_13	genomes	Staphylococcus_aureus_NCTC_8325	NCBI	2006-02-13	Fasta Index .fai File
PIG	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Main Directory
GENOME_PIG	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Genome Fasta File
CHR_PIG	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Chromosome Fasta Files
BOWTIE_PIG	bowtie	Sus_scrofa	NCBI	Sscrofa10.2	Bowtie\|Bowtie2 Index
BOWTIE2_PIG	bowtie2	Sus_scrofa	NCBI	Sscrofa10.2	Bowtie\|Bowtie2 Index
BWA_PIG	bwa	Sus_scrofa	NCBI	Sscrofa10.2	Bwa Index
PICARD_PIG	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Picard .dict File
FAIDX_PIG	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Fasta Index .fai File
SUS_SCROFA_NCBI_SSCROFA10_2	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Main Directory
GENOME_SUS_SCROFA_NCBI_SSCROFA10_2	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Genome Fasta File
CHR_SUS_SCROFA_NCBI_SSCROFA10_2	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Chromosome Fasta Files
BOWTIE_SUS_SCROFA_NCBI_SSCROFA10_2	bowtie	Sus_scrofa	NCBI	Sscrofa10.2	Bowtie\|Bowtie2 Index
BOWTIE2_SUS_SCROFA_NCBI_SSCROFA10_2	bowtie2	Sus_scrofa	NCBI	Sscrofa10.2	Bowtie\|Bowtie2 Index
BWA_SUS_SCROFA_NCBI_SSCROFA10_2	bwa	Sus_scrofa	NCBI	Sscrofa10.2	Bwa Index
PICARD_SUS_SCROFA_NCBI_SSCROFA10_2	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Picard .dict File
FAIDX_SUS_SCROFA_NCBI_SSCROFA10_2	genomes	Sus_scrofa	NCBI	Sscrofa10.2	Fasta Index .fai File
MAIZE	genomes	Zea_mays	Ensembl	AGPv3	Main Directory
GENOME_MAIZE	genomes	Zea_mays	Ensembl	AGPv3	Genome Fasta File
CHR_MAIZE	genomes	Zea_mays	Ensembl	AGPv3	Chromosome Fasta Files
BOWTIE_MAIZE	bowtie	Zea_mays	Ensembl	AGPv3	Bowtie\|Bowtie2 Index
BOWTIE2_MAIZE	bowtie2	Zea_mays	Ensembl	AGPv3	Bowtie\|Bowtie2 Index
BWA_MAIZE	bwa	Zea_mays	Ensembl	AGPv3	Bwa Index
PICARD_MAIZE	genomes	Zea_mays	Ensembl	AGPv3	Picard .dict File
FAIDX_MAIZE	genomes	Zea_mays	Ensembl	AGPv3	Fasta Index .fai File
ZEA_MAYS_ENSEMBL_AGPV3	genomes	Zea_mays	Ensembl	AGPv3	Main Directory
GENOME_ZEA_MAYS_ENSEMBL_AGPV3	genomes	Zea_mays	Ensembl	AGPv3	Genome Fasta File
CHR_ZEA_MAYS_ENSEMBL_AGPV3	genomes	Zea_mays	Ensembl	AGPv3	Chromosome Fasta Files
BOWTIE_ZEA_MAYS_ENSEMBL_AGPV3	bowtie	Zea_mays	Ensembl	AGPv3	Bowtie\|Bowtie2 Index
BOWTIE2_ZEA_MAYS_ENSEMBL_AGPV3	bowtie2	Zea_mays	Ensembl	AGPv3	Bowtie\|Bowtie2 Index
BWA_ZEA_MAYS_ENSEMBL_AGPV3	bwa	Zea_mays	Ensembl	AGPv3	Bwa Index
PICARD_ZEA_MAYS_ENSEMBL_AGPV3	genomes	Zea_mays	Ensembl	AGPv3	Picard .dict File
FAIDX_ZEA_MAYS_ENSEMBL_AGPV3	genomes	Zea_mays	Ensembl	AGPv3	Fasta Index .fai File
ZEA_MAYS_ENSEMBL_AGPV4	genomes	Zea_mays	Ensembl	AGPv4	Main Directory
GENOME_ZEA_MAYS_ENSEMBL_AGPV4	genomes	Zea_mays	Ensembl	AGPv4	Genome Fasta File
CHR_ZEA_MAYS_ENSEMBL_AGPV4	genomes	Zea_mays	Ensembl	AGPv4	Chromosome Fasta Files
BOWTIE_ZEA_MAYS_ENSEMBL_AGPV4	bowtie	Zea_mays	Ensembl	AGPv4	Bowtie\|Bowtie2 Index
BOWTIE2_ZEA_MAYS_ENSEMBL_AGPV4	bowtie2	Zea_mays	Ensembl	AGPv4	Bowtie\|Bowtie2 Index
BWA_ZEA_MAYS_ENSEMBL_AGPV4	bwa	Zea_mays	Ensembl	AGPv4	Bwa Index
PICARD_ZEA_MAYS_ENSEMBL_AGPV4	genomes	Zea_mays	Ensembl	AGPv4	Picard .dict File
FAIDX_ZEA_MAYS_ENSEMBL_AGPV4	genomes	Zea_mays	Ensembl	AGPv4	Fasta Index .fai File